The "Fork in the Road" mission is basically done. Just need to add the trigger to end the mission when all the clan ships are destroyed. I also need to make the missile ship more powerful. It's suppose to be the big bad of the mission, and I just destroyed it in about 10 seconds using my drone wings.
I think I still need to go to some effort to slow down all of the combat. It's still too quick to destroy other ships.
Also I need to make the nanopods target random locations on the ship. Heading toward the center they all bunch up, which does not look good.
Oh and here's the save screen: